Publications of Volkmar Liebscher
2018
- Liebscher, V. New Gromov-inspired Metrics on Phylogenetic Tree Space. Bull Math Biol (2018). https://doi.org/10.1007/s11538-017-0385-z
Wittenburg W, Liebscher V. An approximate Bayesian significance test for genomic evaluations. Biometrical Journal 2018;60:1096–1109. https://doi.org/10.1002/bimj.201700219
Kruff N, Lax C, Liebscher V, Walcher S.The Rosenzweig–MacArthur system via reduction of an individual based model J Math Biol 2018. https://doi.org/10.1007/s00285-018-1278-y
Siems T, Hellmuth M, Liebscher V. Simultaneous Credible Regions for Multiple Changepoint Locations JCGS 2018.https://doi.org/10.1080/10618600.2018.1513366
2017
- Kasbohm E, Fischer S, Küntzel A, Oertel P, Bergmann A, Trefz P, Miekisch W, Schubert JK, Reinhold P, Ziller M, Fröhlich A, Liebscher V, Köhler H.Strategies for the identification of disease-related patterns of volatile organic compounds: prediction of paratuberculosis in an animal model using random forests. J Breath Res. 2017 Nov;11(4) 047105. doi:10.1088/1752-7163/aa83bb. PMID: 28768897.
2016
- Ivanovska T, Laqua R, Wang L, Schenk A, Yoon JH, Hegenscheid K, Völzke H, Liebscher V. An efficient level set method for simultaneous intensity inhomogeneity correction and segmentation of MR images Computerized Medical Imaging and Graphics 48, 9–20
- Zühlke D, Dörries K, Bernhardt J, Maaß S, Muntel J, Liebscher V, Pané-Farré J, Riedel K, Lalk M, Völker U, Engelmann S,Becher D,Fuchs S, Hecker M. Costs of life - Dynamics of the protein inventory of Staphylococcus aureus during anaerobiosis Scientific Reports 6, 28172
- Martin Theuerkauf, John Couwenberg, Anna Kuparinen, Volkmar LiebscherA matter of dispersal: REVEALSinR introduces state-of-the-art dispersal models to quantitative vegetation reconstruction Vegetation History and Archaeobotany 25(6), 541–553
- Sing, NK, Ernst, M, Liebscher, V, Fuellen, G, Taher, L Revealing complex function, process and pathway interactions with high-throughput expression and biological annotation data. Molecular Biosystems 12 (10), 3196-3208
2015
- Kloppot P, Selle M, Kohler C, Stentzel S, Fuchs S, Liebscher V, Müller E, Kale D, Ohlsen K, Bröker BM, Zipfel PF, Kahl BC, Ehricht R, Hecker M, Engelmann S.Microarray based identification of human antibodies against Staphylococcus aureus antigens.Proteomics Clin Appl. 2015 Feb 11. doi: 10.1002/prca.201400123. [Epub ahead of print]
- V. Liebscher. The relation of spatial and tensor product of Arveson systems — the random set point of view. IDAQP. Vol. 18, No. 4, 2015
- Ameling S, Kacprowski T, Chilukoti RK, Malsch C, Liebscher V, Suhre K, Pietzner M, Friedrich N, Homuth G, Hammer E, Völker U. Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study. BMC Med Genomics 8:61, 2015.
- Ivanovska T, Laqua R, Wang L, Schenk A, Yoon JH, Hegenscheid K, Völzke H, Liebscher V. An efficient level set method for simultaneous intensity inhomogeneity correction and segmentation of MR images. Comput Med Imaging Graph 48:9-20, 2015.
- K.-H. Fichtner, S. Klaere, and V. Liebscher
Solving a Class of Linear Skorokhod Stochastic Differential Equations. Commun. Stoch. Anal. 9(4):457–466
2014
- Ivanovska T, Laqua R, Wang L, Liebscher V, Völzke H, Hegenscheid K. A level set based framework for quantitative evaluation of breast tissue density from MRI data PLoS One. 2014 Nov 25;9(11):e112709. doi: 10.1371/journal.pone.0112709. eCollection 2014.
- Gloger, O, Tönnies, K, Liebscher, V, Völzke, H, Fully Automatic Renal Parenchyma Volumetry in LDA-based Probability Maps Using Variational Outer Cortex Edge Alignment Forces, Ortuno, F and Rojas, I (eds.) 2nd International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO) Apr 07-09, 2014, Granada, SPAIN, , pp.1207-1218
2013
- L. Demaret, F. Friedrich, V. Liebscher, G. Winkler Complexity L0-Penalized M-Estimation: Consistency in More Dimensions. Axioms 2013, 2, 311-344.
- N. Stahnke, V. Liebscher, C. Staubach, M. Ziller An approach to model monitoring and surveillance data of wildlife diseases - exemplified by Classical Swine Fever in wild boar. Preventive Veterinary Medicine 2013112(3–4), 355–369
- N. K. Singh, D. Repsilber,V. Liebscher, L. Taher , G. Fuellen Identifying Genes Relevant to Specific Biological Conditions in Time Course Microarray Experiments PLoS ONE 8(10): e76561. doi:10.1371/journal.pone.0076561
- M. Siatkowski, V. Liebscher, G. FuellenCellFateScout – a bioinformatics tool for elucidating small molecule signaling pathways that drive cells in a specific direction Cell Communication and Signaling 2013, 11:85
- Ivanovska, T, Wang, L, Laqua, R, A Fast Global Variational Bias Field Correction Method for MR Images. 8th International Symposium on Image and Signal Processing and Analysis (ISPA) Location: Trieste, ITALY SEP 04-06, 2013, pp. 667-671
2012
- U.Franz, V.Liebscher, S. Zeiser, Piecewise-deterministic Markov processes as limits of Markov jump processes Adv. in Appl. Probab. Volume 44, Number 3, 729-748.
- S.Kläre, V.Liebscher An algebraic analysis of the two state Markov model on tripod trees Math Biosci. 2012 May;237(1-2):38-48
- O. Gloger, K.D.Tönies, V. Liebscher, B. Kugelmann, R.Laqua, H. Völzke Prior shape level set segmentation on multistep generated probability maps of MR datasets for fully automatic kidney parenchyma volumetry IEEE Trans Med Imaging. 2012 Feb;31(2):312-25
2011
- B.Gotzen, V.Liebscher, S. Walcher, On a Class of Deterministic Population Models with Stochastic Foundation Bull. Math. Biology Volume 73, Number 7,1559-1582
- B. V. Rajarama Bhat, Volkmar Liebscher, Mithun Mukherjee, Michael SkeideThe spatial product of Arveson systems is intrinsic Journal of Functional Analysis, Volume 260, Issue 2, 2011, Pages 566-573
2010
- Zeiser S, Franz U,Liebscher V. Autocatalytic genetic networks modeled by piecewise-deterministic Markov processes. J MATH BIOL 2010 Volume 60, Number 2, Pages 207-246
- Bhat, B. V. Rajarama; Liebscher, Volkmar; Skeide, Michael Subsystems of Fock need not be Fock: spatial CP-semigroups. Proc. Amer. Math. Soc. 138 (2010), no. 7, 2443–2456
2009
- Boysen L, Kempe A, Liebscher V, Munk A, Wittich O. Consistencies and rates of convergence of jump penalized least squares estimators. ANN STAT2009, 37(1):157-183
- Liebscher V Random Sets and Invariants for (Type II) Continuous Tensor Product Systems Mem. AMS 2009, 199(930):1-105
- Zeiser S, Franz U, Müller J, Liebscher V. Hybrid modeling of noise reduction by a negatively autoregulated system. BULL MATH BIOL 2009, 71(4):1006-1024
- Müller J, Kuttler C, Hense B, Zeiser S, Liebscher V. Transcription, intercellular variability and correlated random walk. MATH BIOSCI 2009, 216(1):30-39
- Liebscher, Volkmar; Skeide, Michael Markovian systems of transition expectations. Commun. Stoch. Anal. 3 (2009), no. 2, 165–173
- Liebscher, Volkmar Using weights for the description of states of boson systems.Commun. Stoch. Anal. 3 (2009), no. 2, 175–195
2008
- Friedrich F, Kempe A, Liebscher V, Winkler G. Complexity Penalized M-Estimation: Fast Computation. J COMPUT GRAPH STAT 2008, 17(1):201-224
- Liebscher V, Skeide M. Constructing units in product systems. P AM MATH SOC2008, 136:989-997
- Gotzen B, Liebscher V, Walcher S. Populationsmodelle Mathematische Modellierung an einem Fallbeispiel. Mathematische Semesterberichte 2008, 55:161-179
- Zeiser S, Franz U, Wittich O, Liebscher V. Simulation of genetic networks modelled by piecewise deterministic Markov processes. IET SYST BIOL 2008, 2(3):113-135
- O.Wittich, A.Kempe, G.Winkler, V. Liebscher Complexity Penalized Least Squares Estimators: Analytical Results Math.Nachr. 281(4):1-14
2007
- A.-L. Boulesteix, V.Hösel, V. Liebscher Stochastic modeling for the COMET-assayJournal of Concrete and Applicable Mathematics, 5(1):53-76
- S. Zeiser, J. Müller, V. Liebscher, Modelling the Hes1 Oscillator During Somitogenesis Journal of Computational Biology 14(7):984-1000 link to publisher
- D. Dossing, V. Liebscher , H. Wagner, S. Walcher Evolution, Bäume und Algorithmen MNU 60(2):68-75
- L. Boysen, V. Liebscher , A.Munk, O. Wittich, Scale space consistency of piecewise constant least squares estimators - another look at the regressogram. In:Asymptotics: Particles, Processes and Inverse Problems E. Cator, G. Jongbloed, C. Kraaikamp, R. Lopuhaä and J. Wellner, Editors IMS Lecture Notes - Monograph Series Vol. 55, 65-84, Institute of Mathematical Statistics, Baltimore, 2007
- J. Wagenstaller, S. Spranger, B. Lorenz-Depiereux, B. Kazmierczak, M. Nathrath, D. Wahl, B. Heye, D. Gläser, V. Liebscher , T. Meitinger, T.M. Strom Copy number variations measured by SNP oligonucleotide arrays in patients with mental retardation Am J Hum Genet. 2007 Oct;81(4):768-79
2006
- S. Zeiser, H.V. Liebscher , H. Tiedemann , I. Rubio-Aliaga , G.K.H. Przemeck, M. Hrabe de Angelis, G. Winkler Number of active transcription factor binding sites is essential for the Hes7 oscillator Theoretical Biology and Medical Modelling 2006, 3:11 link to Open Access article
2005
- G.Winkler, O.Wittich, V. Liebscher, A.Kempe Don't shed Tears over BreaksJahresbericht der DMV 107(2):57-87
- T. Mijalski, A. Harder, T. Halder, M. Kersten, M. Horsch, T.M. Strom, H.V. Liebscher, F. Lottspeich, M. Hrabe de Angelis, J. Beckers Identification of coexpressed gene clusters in a comparative analysis of transcriptome and proteome in mouse tissues PNAS 102(24):8621-6. link to article
- G. Winkler, A. Kempe, V. Liebscher and O. Wittich Parsimonious Segmentation of Time Series' by Potts Models In Proceedings of the 27th Annual Conference of the GfKl. Special issue of "Studies in Classification, Data Analysis, and Knowledge Organization", D. Baier and K.-D. Wernecke (editors), Springer, 295-302
- K.H. Fichtner, V. Liebscher , M.Ohya A Limit Theorem for Conditionally Independent Beam Splittings In Quantum Probability and Infinite Dimensional Analysis. From Foundations to Applications, Krupp-Kolleg Greifswald, Germany 22 - 28 June 2003, volume 18 of QP-PQ Quantum Probability and White Noise Analysis, M. Schürmann, U. Franz (editors), World Scientific Singapore, 227-236
2004
- S.D. Barreto, B.V.R. Bhat, V. Liebscher, M. Skeide, Type I Product Systems of Hilbert Modules Journal of Functional Analysis 212 (2004) 121-181 link to article
- W.B. Wahl, R. Caldwell, A.M. Kierzek, H.Arakawa, N. Hubner, C. Jung, M. Soeldenwagner, M. Cervelli, Y.-D. Wang, V. Liebscher, J.-M.Buerstedde Evaluation of the chicken transcriptome by SAGE of B cells and the DT40 cell line BMC Genomics 2004, 5:98 (21 Dec 2004) link to article
- F. Friedrich, G. Winkler, O. Wittich, and V. Liebscher An elementary rigorous introduction to exact sampling In Recent Advances in Applied Probability R. Baeza-Yates (Editor), J. Glaz (Editor), Henryk Gzyl (Editor), Jürgen Hüsler (Editor), José Luis Palacios (Editor), pp. 143 -162, Springer
- K.-H. Fichtner, W. Freudenberg, and V. Liebscher On Exchange Mechanisms for Bosons Random Oper. and Stoch. Equ. 12 (4):331-348 2004
2003
- A.L. Drobyshev, Ch. Machka, M. Horsch, M. Seltmann, V. Liebscher , M. Hrabé de Angelis, and J. Beckers Specificity assessment from fractionation experiments (SAFE): a novel method to evaluate microarray probe specificity based on hybridisation stringencies Nucleic Acids Res. 31(2):1-10 2003 link
- V. Liebscher Markovianity of quantum random fields in the B(H) case in W. Freudenberg, editor Proceedings of the Conference "Quantum Probability and Infinite-Dimensional Analysis" Burg, Germany 15 - 20 March 2001, volume 15 ofQP-PQ Quantum Probability and White Noise Analysis Singapore 2003 World Scientific pages 151--159
- V. Liebscher Isometric cocycles related to beam splittings in W. Freudenberg, editor Proceedings of the Conference "Quantum Probability and Infinite-Dimensional Analysis" Burg, Germany 15 - 20 March 2001, volume 15 ofQP-PQ Quantum Probability and White Noise Analysis Singapore 2003 World Scientific pages 161--180
- V. Hösel and V. Liebscher Towards new Mathematical Models for Biofilms inS. Wuertz, P.A.Wilderer, P.L.Bishop, eds., Biofilms in Wastewater Treatment: An Interdisciplinary Approach IWA Publishing, London, 2003 pages 49-59
2002
2001
- V. Liebscher and M. Skeide Units for the Time Ordered Fock Module IDAQP 4(4):545-551 2001
- V. Liebscher and S. Walcher On the mean value of probability measures on circular graphs Res. Math.39: 58-90 2001
- V. Liebscher A Limit Theorem for Quantum Markov Chains associated to Beam Splittings Open Systems and Information Dynamics 8:1-29 2001
- V. Liebscher How to generate Markovian Cocycles on Boson Fock space IDAQP 4(2):215-219 2001
2000
- K.-H. Fichtner, W. Freudenberg, and V. Liebscher Characterization of Classical and Quantum Poisson Systems by Thinnings and Splittings Math.Nachr. 218:25 - 47 2000
- F.Frühauf and V. Liebscher Quantitative Analyse eines von Protozoen erzeugten Strömungsfeldes In Proceedings of the DAGM 2000
- K. Rodenacker, A. Brühl, M. Hausner, M. Kühn, V. Liebscher , M. Wagner, G. Winkler, and S. Wuertz Quantification of biofilms in multi-spectral digital volumes from confocal laser-scanning microscopes Image Anal. Stereol.19:151--156 2000
- V. Liebscher Integration by parts formulae for point processes In Stochastic Processes, Physics and Geometry: New Interplays. II: A Volume in Honor of Sergio Albeverio. CMS Conference Proceedings Series Amer.Math.Soc. 2000 pages 447--454
- V. Liebscher Two Notes on Adapted Processes In Trends in Contemporary Infinite Dimensional Analysis and Quantum Probability. Essays in Honour of Professor Takeyuki Hida for his 70th Birthday volume 3 of Natural and Mathematical Sciences Series 3 Italian School of East Asian Studies Kyoto 2000 pages 251--255
1999
- V. Liebscher On a Central Limit Theorem for Monotone Noise Infinite Dimensional Analysis, Quantum Probability and Related Topics 2(1):155-167 1999
- G. Winkler and V. Liebscher A Potts model for segmentation and jump detection In Proceedings of the SSSSG Conference Prag 1999
- G. Winkler, V. Liebscher, and V. Aurich Probabilistic image smoothing: Recent advances In Proceedings of the SSSSG Conference Prag 1999
- V. Liebscher Note on Entangled Ergodic Theorems Infinite Dimensional Analysis, Quantum Probability and Related Topics 2(2):301-304 1999
- L. Accardi and V. Liebscher Markovian KMS-States for Onedimensional Spin Chains Infinite Dimensional Analysis, Quantum Probability and Related Topics 2(4): 645-661 1999
- A.M.Chebotarev and V. Liebscher On Relative Boundedness in Operator Spaces Rep.Math.Phys. 44 (3):339-344 1999
- U. Bhattacharya, V. Liebscher, A. Datta, S.K. Parui, K. Rodenacker, and B.B. Chaudhuri Vector Quantization of Volumetric Images of Filamentous Bacteria Using Topology Preserving Feature Maps Proceedings of ICPR 2000, Barcelona, Sep. 3-8, 2000
1998
- K.-H. Fichtner, W. Freudenberg, and V. Liebscher Splittings and Gibbs StatesMath.Zam. 64(4):598-605 1998
- K.-H. Fichtner, W. Freudenberg, and V. Liebscher Time Evolution and Invariance of Boson Systems Given by Beam Splittings Infinite Dimensional Analysis, Quantum Probability and Related Topics 1(4):511-531 1998
- V. Liebscher A Gibbs Theory for States of Boson Systems In T. Matsui, editor, Recent trends in Infinite Dimensional Non-Commutative Analysis volume 1035 of RIMS Kokyuroku Kyoto 1998
- V. Liebscher Beam Splittings, Coherent States and Quantum Stochastic Differential Equations Habilitation thesis FSU Jena 1998
- V. Liebscher Diagonal Versions and Quantum Stochastic Integrals on the Symmetric Fock Space with Nonadapted Integrands Prob.Th.Rel.Fields112:255-295 1998
- V. Liebscher A Generalization of the Conservation Integral Banach Center Publications 43:273-284 1998
- V. Liebscher Multiple Integrals and the isomorphism between a general white noise space and a Symmetric Fock Space Quantum Probability Communications X:245-259 1998
1996
- K.-H. Fichtner, W. Freudenberg, and V. Liebscher Beam Splittings and Time Evolutions of Boson Systems Forschungsergebnisse der Fakultät für Mathematik und Informatik Jena Math/Inf/96/39 1996
- V. Liebscher On the Characterization of Pure Locally Normal States In C. Cecchini, editor, Contributions in Probability. In memory of Alberto Frigerio Forum Udine 1996 pages 141 - 154
- V. Liebscher Characterization of Coherent and Mixed Coherent States by Beam Splittings Forschungsergebnisse der Fakultät für Mathematik und Informatik Jena Math/Inf/96/16 1996
- V. Liebscher Diagonal Integration and Diagonalized Versions Forschungsergebnisse der Fakultät für Mathematik und Informatik Jena Math/Inf/96/38 1996
1994
- V. Liebscher On the Isomorphism of Poisson Space and Symmetric Fock SpaceIn L. Accardi, editor, Quantum Probability & Related Topics IX World Scientific Singapore 1994 pages 295 - 300
1993
- V. Liebscher Conditional Local States and Decomposition of Locally Normal States Math. Nachr. 164:103-117 1993
- V. Liebscher Bedingte lokale Zustände und Charakterisierung lokalnormaler Zustände unendlicher Bosonensysteme Dissertation FSU Jena 1993
1991
- V. Liebscher Reinheitsgrade und Reinheit normaler und lokalnormaler Zustände Diplomarbeit FSU Jena 1991